Publications

2022

  • Lorenzo Bonaguro, Jonas Schulte-Schrepping, Thomas Ulas, Anna C. Aschenbrenner, Marc Beyer, Joachim L. Schultze:
    A guide to systems-level immunomics
    Nature Immunology, 10.1038/s41590-022-01309-9

  • Rosati, Elisa, Gabriela Rios Martini, Mikhail V. Pogorelyy, Anastasia A. Minervina, Frauke Degenhardt, Mareike Wendorff, Soner Sari, Gabriele Mayr, Antonella Fazio, Christel Marie Dowds, Charlotte Hauser, Florian Tran, Witigo von Schönfels, Julius Pochhammer, Maria A. Salnikova, Charlot Jaeckel, Johannes Boy Gigla, Sanaz Sedghpour Sabet, Matthias Hübenthal, Esther Schiminsky, Stefan Schreiber, Philip C. Rosenstiel, Alexander Scheffold, Paul G. Thomas, Wolfgang Lieb, Bernd Bokemeyer, Maria Witte, Konrad Aden, Alexander Hendricks, Clemens Schafmayer, Jan-Hendrick Egberts, Ilgar Z. Mamedov, Petra Bacher, Andre Franke:
    A novel unconventional T cell population enriched in Crohn’s disease
    Gut, 10.1136/gutjnl-2021-325373

  • Hui Yang, Jinyuan Wu, Xiaochang Huang, Yunyan Zhou, Yifeng Zhang, Min Liu, Qin Liu, Shanlin Ke, Maozhang He, Hao Fu, Shaoming Fang, Xinwei Xiong, Hui Jiang, Zhe Chen, Zhongzi Wu, Huanfa Gong, Xinkai Tong, Yizhong Huang, Junwu Ma, Jun Gao, Carole Charlier, Wouter Coppieters, Lev Shagam, Zhiyan Zhang, Huashui Ai, Bin Yang, Michel Georges, Congying Chen & Lusheng Huang:
    ABO genotype alters the gut microbiota by regulating GalNAc levels in pigs
    Nature, 10.1038/s41586-022-04769-z

  • Kevin Baßler, Wataru Fujii, Theodore S Kapellos, Erika Dudkin, Nico Reusch, Ari Horne, Benedikt Reiz Malte D Luecken, Collins Osei-Sarpong, Stefanie Warnat-Herresthal, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Allon Wagner, Patrick Günther, Carmen Pizarro, Tina Schreiber, Rainer Knoll, Lisa Holsten, Charlotte Kröger, Elena De Domenico, Matthias Becker, Kristian Händler, Christian T Wohnhaas, Florian Baumgartner, Meike Köhler, Heidi Theis, Michael Kraut, Marc H Wadsworth, Travis K Hughes, Humberto J Ferreira, Emily Hinkley, Ines H Kaltheuner, Matthias Geyer, Christoph Thiele, Alex K Shalek, Andreas Feißt, Daniel Thomas, Henning Dickten, Marc Beyer , Patrick Baum, Nir Yosef, Anna C Aschenbrenner, Thomas Ulas, Jan Hasenauer, Fabian J Theis, Dirk Skowasch, Joachim L Schultze:
    Alveolar macrophages in early stage COPD show functional deviations with properties of impaired immune activation
    Frontiers in Immunology, 10.3389/fimmu.2022.917232

  • Vyacheslav A. Petrov, Sodbo Zh. Sharapov, Lev Shagam, Arina V. Nostaeva, Marija Pezer, Dalin Li, Maja Hanić, Dermot McGovern, Edouard Louis, Souad Rahmouni, Gordan Lauc, Michel Georges and Yurii S. Aulchenko:
    Association Between Human Gut Microbiome and N-Glycan Composition of Total Plasma Proteome
    Frontiers in Microbiology, 10.3389/fmicb.2022.811922

  • Thomas Sénard, Irini Flouri, Frano Vučković, Garyfalia Papadaki, Panagiota Goutakoli, Aggelos Banos, Maja Pučić-Baković, Marija Pezer, George Bertsias, Gordan Lauc, and Prodromos Sidiropoulos:
    Baseline IgG-Fc N-glycosylation profile is associated with long-term outcome in a cohort of early inflammatory arthritis patients
    Arthritis Research & Therapy, 10.1186/s13075-022-02897-5

  • Minervina, Anastasia A., Mikhail V. Pogorelyy, Steffen Paysen, Ulrich Luening, Frauke Degenhardt, Andre Franke, Paul G. Thomas, Elisa Rosati:
    Crohn’s-associated invariant T cells (CAITs) recognise small sulfonate molecules on CD1d
    Gut, 10.1136/gutjnl-2022-328684

  • Eleni Frangou, Panayiotis Garantziotis, Maria Grigoriou, Aggelos Banos, Dionysis Nikolopoulos, Antigoni Pieta, Stavros A. Doumas, Antonis Fanouriakis, Aikaterini Hatziioannou, Theodora Manolakou, Themis Alissafi, Panayiotis Verginis, Emmanouil Athanasiadis, Emmanouil Dermitzakis, George Bertsias, Anastasia Filia, Dimitrios T. Boumpas:
    Cross-species transcriptome analysis for early detection and specific therapeutic targeting of human lupus nephritis
    Annals of the rheumatic diseases 81(10), 1409-1419, 10.1136/annrheumdis-2021-222069

  • Caterina Carraro, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Arik Horne, Marie Oestreich, Stefanie Warnat-Herresthal, Tim Helbing, Michele De Franco, Kristian Haendler, Sach Mukherjee, Thomas Ulas, Valentina Gandin, Richard Goettlich, Anna C Aschenbrenner, Joachim L Schultze, and Barbara Gatto:
    Decoding mechanism of action and sensitivity to drug candidates from integrated transcriptome and chromatin state
    eLife, 10.7554/eLife.78012

  • Jerko Štambuk, Frano Vučković, Siniša Habazin, Maja Hanić, Mislav Novokmet, Susanna Nikolaus, Florian Tran, Stefan Schreiber, Andre Franke, Philip Rosenstiel, Gordan Lauc, Konrad Aden, Marija Pezer:
    Distinct Longitudinal Changes in Immunoglobulin G N-glycosylation Associate with Therapy Response in Chronic Inflammatory Diseases
    International Journal of Molecular Sciences 23(15), 8473, 10.3390/ijms23158473

  • Silja H. Overgaard, Signe B. Sørensen, Heidi L. Munk, Anders B. Nexøe, Henning Glerup, Rikke H. Henriksen, Tanja Guldmann, Natalia Pedersen, Sanaz Saboori, Lone Hvid, Jens F. Dahlerup, Christian L. Hvas, Mohamad Jawhara, Karina W. Andersen, Andreas K. Pedersen, Ole H. Nielsen, Fredrik Bergenheim, Jacob Brodersen, Berit L. Heitmann, Thorhallur I. Halldorsson, Uffe Holmskov, Anette Bygum, Torkell Ellingsen, Jens Kjeldsen, Robin Christensen, Vibeke Andersen:
    Impact of fibre and red/processed meat intake on treatment outcomes among patients with chronic inflammatory diseases: a prospective cohort study
    Frontiers in Nutrition, 10.3389/fnut.2022.985732

  • Aleksejs Sazonovs, Christine R. Stevens, Guhan R. Venkataraman, Kai Yuan, Brandon Avila, Maria T. Abreu, Tariq Ahmad, Matthieu Allez, Ashwin N. Ananthakrishnan, Gil Atzmon, Aris Baras, Jeffrey C. Barrett, Nir Barzilai, Laurent Beaugerie, Ashley Beecham, Charles N. Bernstein, Alain Bitton, Bernd Bokemeyer, Andrew Chan, Daniel Chung, Isabelle Cleynen, Jacques Cosnes, David J. Cutler, Allan Daly, Oriana M. Damas, Lisa W. Datta, Noor Dawany, Marcella Devoto, Sheila Dodge, Eva Ellinghaus, Laura Fachal, Martti Farkkila, William Faubion, Manuel Ferreira, Denis Franchimont, Stacey B. Gabriel, Tian Ge, Michel Georges, Kyle Gettler, Mamta Giri, Benjamin Glaser, Siegfried Goerg, Philippe Goyette, Daniel Graham, Eija Hämäläinen, Talin Haritunians, Graham A. Heap, Mikko Hiltunen, Marc Hoeppner, Julie E. Horowitz, Peter Irving, Vivek Iyer, Chaim Jalas, Judith Kelsen, Hamed Khalili, Barbara S. Kirschner, Kimmo Kontula, Jukka T. Koskela, Subra Kugathasan, Juozas Kupcinskas, Christopher A. Lamb, Matthias Laudes, Chloé Lévesque, Adam P. Levine, James D. Lewis, Claire Liefferinckx, Britt-Sabina Loescher, Edouard Louis, John Mansfield, Sandra May, Jacob L. McCauley, Emebet Mengesha, Myriam Mni, Paul Moayyedi, Christopher J. Moran, Rodney D. Newberry, Sirimon O’Charoen, David T. Okou, Bas Oldenburg, Harry Ostrer, Aarno Palotie, Jean Paquette, Joel Pekow, Inga Peter, Marieke J. Pierik, Cyriel Y. Ponsioen, Nikolas Pontikos, Natalie Prescott, Ann E. Pulver, Souad Rahmouni, Daniel L. Rice, Päivi Saavalainen, Bruce Sands, R. Balfour Sartor, Elena R. Schiff, Stefan Schreiber, L. Philip Schumm, Anthony W. Segal, Philippe Seksik, Rasha Shawky, Shehzad Z. Sheikh, Mark S. Silverberg, Alison Simmons, Jurgita Skeiceviciene, Harry Sokol, Matthew Solomonson, Hari Somineni, Dylan Sun, Stephan Targan, Dan Turner, Holm H. Uhlig, Andrea E. van der Meulen, Séverine Vermeire, Sare Verstockt, Michiel D. Voskuil, Harland S. Winter, Justine Young, Belgium IBD Consortium, Cedars-Sinai IBD, International IBD Genetics Consortium, NIDDK IBD Genetics Consortium, NIHR IBD BioResource, Regeneron Genetics Center, SHARE Consortium, SPARC IBD Network, UK IBD Genetics Consortium, Richard H. Duerr, Andre Franke, Steven R. Brant, Judy Cho, Rinse K. Weersma, Miles Parkes, Ramnik J. Xavier, Manuel A. Rivas, John D. Rioux, Dermot P. B. McGovern, Hailiang Huang, Carl A. Anderson & Mark J. Daly :
    Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility
    Nature Genetics, 10.1038/s41588-022-01156-2

  • Neha Mishra, Konrad Aden, Johanna I. Blase, Dora Bordoni, Claudio Conrad, Diana Avalos, Charlot Jaeckel, Nathan Baran, Michael Scherer, Signe B. Sørensen, Silja H. Overgaard, Berenice Schulte, Susanna Nikolaus, Guillaume Rey, Gilles Gasparoni, Paul A. Lyons, Joachim L. Schultze, Jörn Walter, Vibeke Andersen, Emmanouil T. Dermitzakis, Stefan Schreiber, Philip Rosenstiel, SYSCID Consortium :
    Longitudinal multi-omics analysis identifies early blood-based predictors of anti-TNF therapy response in inflammatory bowel disease
    Genome Medicine, 10.1186/s13073-022-01112-z

  • Panagiotis Garantziotis, Dimitrios Nikolakis, Stavros Doumas, Eleni Frangou, George Sentis, Anastasia Filia, Antonis Fanouriakis, George Bertsias, Dimitrios T Boumpas :
    Molecular Taxonomy of Systemic Lupus Erythematosus Through Data-Driven Patient Stratification: Molecular Endotypes and Cluster-Tailored Drugs
    Frontiers in Immunology, 10.3389/fimmu.2022.860726

2021

  • Philipp Georg, Rosario Astaburuaga-García, Lorenzo Bonaguro, Sophia Brumhard, Laura Michalick, Lena, J. Lippert, Tomislav Kostevc, Christiane Gäbel, Maria Schneider, Mathias Streitz, Vadim Demichev, Ioanna Gemünd, Matthias Barone, Pinkus Tober-Lau, Elisa T. Helbig, David Hillus, Lev Petrov, Julia Stein, Hannah-Philine Dey, Daniela Paclik, Christina Iwert, Michael Mülleder, Simran, Kaur Aulakh, Sonja Djudjaj, Roman D. Bülow, Henrik E. Mei, Axel R. Schulz, Andreas Thiel, Stefan Hippenstiel, Antoine-Emmanuel Saliba, Roland Eils, Irina Lehmann, Marcus A. Mall, Sebastian Stricker, Jobst Röhmel, Victor M. Corman, Dieter Beule, Emanuel Wyler, Markus Landthaler, Benedikt Obermayer, Saskia von Stillfried, Peter Boor, Münevver Demir, Hans Wesselmann, Norbert Suttorp, Alexander Uhrig, Holger Müller-Redetzky, Jacob Nattermann, Wolfgang M. Kuebler, Christian Meisel, Markus Ralser, Joachim L.Schultze, Anna C.Aschenbrenner, Charlotte Thibeault, Florian Kurth, Leif E.Sander, Nils Blüthgen, Birgit Sawitzki, PA-COVID-Study Group:
    Complement activation induces excessive T cell cytotoxicity in severe COVID-19
    Cell, https://doi.org/10.1016/j.cell.2021.12.040

  • Joachim L. Schultze, Anna C. Aschenbrenner:
    COVID-19 and the human innate immune system
    Cell 184/7, 10.1016/j.cell.2021.02.029

  • Dionysis Nikolopoulos, Dimitris Kitsos, Matilda Papathanasiou, Maria Chondrogianni, Aikaterini Theodorou, Panagiotis Garantziotis, Antigone Pieta, Triantafyllos Doskas, George Berts, Konstantinos Voumvourakis, Dimitrios T Boumpas, Antonis Fanouriakis :
    Demyelination with autoimmune features: a distinct clinical entity? Results from a longitudinal cohort
    Rhematology, 10.1093/rheumatology/keaa902

  • Anna C. Aschenbrenner, Maria Mouktaroudi, Benjamin Krämer, Marie Oestreich, Nikolaos Antonakos, Melanie Nuesch-Germano, Konstantina Gkizeli, Lorenzo Bonaguro, Nico Reusch, Kevin Baßler, Maria Saridaki, Rainer Knoll, Tal Pecht, Theodore S. Kapellos, Sarandia Doulou, Charlotte Kröger, Miriam Herbert, Lisa Holsten, Arik Horne, Ioanna D. Gemünd, Nikoletta Rovina, Shobhit Agrawal, Kilian Dahm, Martina van Uelft, Anna Drews, Lena Lenkeit, Niklas Bruse, Jelle Gerretsen, Jannik Gierlich, Matthias Becker, Kristian Händler, Michael Kraut, Heidi Theis, Simachew Mengiste, Elena De Domenico, Jonas Schulte-Schrepping, Lea Seep, Jan Raabe, Christoph Hoffmeister, Michael ToVinh, Verena Keitel, Gereon Rieke, Valentina Talevi, Dirk Skowasch, N. Ahmad Aziz, Peter Pickkers, Frank L. van de Veerdonk, Mihai G. Netea, Joachim L. Schultze, Matthijs Kox, Monique M. B. Breteler, Jacob Nattermann, Antonia Koutsoukou, Evangelos J. Giamarellos-Bourboulis, Thomas Ulas:
    Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients
    Genome Medicine 13/1, 10.1186/s13073-020-00823-5

  • Benjamin Krämer, Rainer Knoll, Lorenzo Bonaguro, Michael To Vinh, Jan Raabe, Rosario Astaburuaga-García, Jonas Schulte-Schrepping, Kim Melanie Kaiser, Gereon J. Rieke, Jenny Bischoff, Malte B. Monin, Christoph Hoffmeister, Stefan Schlabe, Elena De Domenico, Nico Reusch Kristian Händler, Gary Reynolds, Nils Blüthgen, Gudrun Hack, Claudia Finnemann, Hans D. Nischalke, Christian P. Strassburg, Emily Stephenson, Yapeng Su, Louis Gardner, Dan Yuan, Daniel Chen, Jason Goldman, Philipp Rosenstiel, Susanne V.Schmidt, Eicke Latz, Kevin Hrusovsky, Andrew J. Ball, Joe M. Johnson, Paul-Albert Koenig, Florian I. Schmidt, Muzlifah Haniffa, James R. Heath, Beate M. Kümmerer, Verena Keitel, Björn Jensen, Paula Stubbemann, Florian Kurth, Leif E. Sander, Birgit Sawitzki :
    Early IFN-α signatures and persistent dysfunction are distinguishing features of NK cells in severe COVID-19
    Immunity, https://doi.org/10.1016/j.immuni.2021.09.002

  • Olatz Mompeo, Rachel Gibson, Paraskevi Christofidou, Tim D. Spector, Cristina Menni and Massimo Mangino:
    Genetic and environmental influences of dietary indices in a UK female twin cohort
    Twin Research and Human Genetics, 1-8, https://doi.org/10.1017/thg.2020.84

  • Xiaoni Meng, Manshu Song, Marija Vilaj, Jerko Štambuk, Mamatyusupu Dolikun, Jie Zhang, Di Liu, Hao Wang, Xiaoyu Zhang, Jinxia Zhang, Weijie Cao, Ana Momčilović, Irena Trbojević-Akmačić, Xingang Li, Deqiang Zheng, Lijuan Wu, Xiuhua Guo, Youxin Wang, Gordan Lauc, Wei Wang:
    Glycosylation of IgG Associates with Hypertension and Type 2 Diabetes Mellitus Comorbidity in the Chinese Muslim Ethnic Minorities and the Han Chinese
    Journal of Personalized Medicine, 10.3390/jpm11070614

  • Michael Scherer, Gilles Gasparoni, Souad Rahmouni, Tatiana Shashkova, Marion Arnoux, Edouard Louis, Arina Nostaeva, Diana Avalos, Emmanouil T. Dermitzakis, Yurii S. Aulchenko, Thomas Lengauer, Paul A. Lyons, Michel Georges, Jörn Walter :
    Identification of tissue-specific and common methylation quantitative trait loci in healthy individuals using MAGAR
    Epigenetics & Chromatin 14, 10.1186/s13072-021-00415-6

  • Urmo Võsa, Annique Claringbould, Harm-Jan Westra, Marc Jan Bonder, Patrick Deelen, Biao Zeng, Holger Kirsten, Ashis Saha, Roman Kreuzhuber, Seyhan Yazar, Harm Brugge, Roy Oelen, Dylan H. de Vries, Monique G. P. van der Wijst, Silva Kasela, Natalia Pervjakova, Isabel Alves, Marie-Julie Favé, Mawussé Agbessi, Mark W. Christiansen, Rick Jansen, Ilkka Seppälä, Lin Tong, Alexander Teumer, Katharina Schramm, Gibran Hemani, Joost Verlouw, Hanieh Yaghootkar, Reyhan Sönmez Flitman, Andrew Brown, Viktorija Kukushkina, Anette Kalnapenkis, Sina Rüeger, Eleonora Porcu, Jaanika Kronberg, Johannes Kettunen, Bernett Lee, Futao Zhang, Ting Qi, Jose Alquicira Hernandez, Wibowo Arindrarto, Frank Beutner, BIOS Consortium, i2QTL Consortium, Julia Dmitrieva, Mahmoud Elansary, Benjamin P. Fairfax, Michel Georges, Bastiaan T. Heijmans, Alex W. Hewitt, Mika Kähönen, Yungil Kim, Julian C. Knight, Peter Kovacs, Knut Krohn, Shuang Li, Markus Loeffler, Urko M. Marigorta, Hailang Mei, Yukihide Momozawa, Martina Müller-Nurasyid, Matthias Nauck, Michel G. Nivard, Brenda W. J. H. Penninx, Jonathan K. Pritchard, Olli T. Raitakari, Olaf Rotzschke, Eline P. Slagboom, Coen D. A. Stehouwer, Michael Stumvoll, Patrick Sullivan, Peter A. C. ’t Hoen, Joachim Thiery, Anke Tönjes, Jenny van Dongen, Maarten van Iterson, Jan H. Veldink, Uwe Völker, Robert Warmerdam, Cisca Wijmenga, Morris Swertz, Anand Andiappan, Grant W. Montgomery, Samuli Ripatti, Markus Perola, Zoltan Kutalik, Emmanouil Dermitzakis, Sven Bergmann, Timothy Frayling, Joyce van Meurs, Holger Prokisch, Habibul Ahsan, Brandon L. Pierce, Terho Lehtimäki, Dorret I. Boomsma, Bruce M. Psaty, Sina A. Gharib, Philip Awadalla, Lili Milani, Willem H. Ouwehand, Kate Downes, Oliver Stegle, Alexis Battle, Peter M. Visscher, Jian Yang, Markus Scholz, Joseph Powell, Greg Gibson, Tõnu Esko & Lude Franke:
    Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression
    Nature Genetics 53, 10.1038/s41588-021-00913-z

  • Rainer Knoll, Joachim L. Schultze, Jonas Schulte-Schrepping:
    Monocytes and Macrophages in COVID-19
    Frontiers in Immunology, 10.3389/fimmu.2021.720109

  • Nico Reusch, Elena De Domenico, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Kevin Baßler, Joachim L. Schultze, Anna C. Aschenbrenner:
    Neutrophils in COVID-19
    Frontiers in Immunology 12

  • Claire Liefferinckx, Zacharie De Grève, Jean-François Toubeau, Hélène Perée, Eric Quertinmont, Vjola Tafciu, Charlotte Minsart, Souad Rahmouni, Michel Georges, François Vallée & Denis Franchimont:
    New approach to determine the healthy immune variations by combining clustering methods
    Scientific Reports, 10.1038/s41598-021-88272-x

  • Maria Grigoriou, Aggelos Banos, Aikaterini Hatzioannou, Andreas Kloetgen, Panagiotis Kouzis, Despoina Aggouraki, Roubini Zakopoulou, Giorgos Bamias, Eva Kassi, Dimitrios Mavroudis, Aristotelis Bamias, Dimitrios T Boumpas, Aristotelis Tsirigos, Helen Gogas, Themis Alissafi, Panayotis Verginis:
    Regulatory T-cell Transcriptomic Reprogramming Characterizes Adverse Events by Checkpoint Inhibitors in Solid Tumors
    Cancer Immunology Research, 10.1158/2326-6066.CIR-20-0969

  • Stefanie Warnat-Herresthal, Hartmut Schultze, Krishnaprasad Lingadahalli Shastry, Sathyanarayanan Manamohan, Saikat Mukherjee, Vishesh Garg, Ravi Sarveswara, Kristian Händler, Peter Pickkers, N Ahmad Aziz, Sofia Ktena, Florian Tran, Michael Bitzer, Stephan Ossowski, Nicolas Casadei, Christian Herr, Daniel Petersheim, Uta Behrends, Fabian Kern, Tobias Fehlmann, Philipp Schommers, Clara Lehmann, Max Augustin, Jan Rybniker, Janine Altmüller, Neha Mishra, Joana P Bernardes, Benjamin Krämer, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Elena De Domenico, Christian Siever, Michael Kraut, Milind Desai, Bruno Monnet, Maria Saridaki, Charles Martin Siegel, Anna Drews, Melanie Nuesch-Germano, Heidi Theis, Jan Heyckendorf, Stefan Schreiber, Sarah Kim-Hellmuth, COVID-, Aachen Study (COVAS); Jacob Nattermann, Dirk Skowasch, Ingo Kurth, Andreas Keller, Robert Bals, Peter Nürnberg, Olaf Rieß, Philip Rosenstiel, Mihai G Netea, Fabian Theis, Sach Mukherjee, Michael Backes, Anna C Aschenbrenner, Thomas Ulas, Deutsche COVID-, Omics Initiative (DeCOI); Monique M B Breteler, Evangelos J Giamarellos-Bourboulis, Matthijs Kox, Matthias Becker, Sorin Cheran, Michael S Woodacre, Eng Lim Goh, Joachim L Schultze :
    Swarm Learning for decentralized and confidential clinical machine learning
    Nature, 10.1038/s41586-021-03583-3.

  • Doris Vandeputte, Lindsey De Commer, Raul Y Tito, Gunter Kathagen, João Sabino, Séverine Vermeire, Karoline Faust, Jeroen Raes:
    Temporal variability in quantitative human gut microbiome profiles and implications for clinical research
    Nature communications

  • Stefan Schreiber, Konrad Aden, Joana P. Bernardes, Claudio Conrad, Florian Tran, Hanna Höper, Valery Volk, Neha Mishra, Johanna Ira Blase, Susanna Nikolaus, Johannes Bethge, Tanja Kühbacher, Christoph Röcken, Minhu Chen, Ian Cottingham, Niclas Petri, Birgitte B. Rasmussen, Juliane Lokau, Lennart Lenk, Christoph Garbers, Friedrich Feuerhake, Stefan Rose-John, Georg H. Waetzig, Philip Rosenstiel:
    Therapeutic Interleukin-6 Trans-signaling Inhibition by Olamkicept (sgp130Fc) in Patients With Active Inflammatory Bowel Disease
    Gastroenterology, 10.1053/j.gastro.2021.02.062

  • Degenhardt, F., G. Mayr, M. Wendorff, G. Boucher, E. Ellinghaus, D. Ellinghaus, H. ElAbd, E. Rosati, M. Hübenthal, S. Juzenas, S. Abedian, H. Vahedi, B. K. Thelma, S. K. Yang, B. D. Ye, J. H. Cheon, L. W. Datta, N. E. Daryani, P. Ellul, M. Esaki, Y. Fuyuno, D. P. B. McGovern, T. Haritunians, M. Hong, G. Juyal, E. S. Jung, M. Kubo, S. Kugathasan, T. L. Lenz, S. Leslie, R. Malekzadeh, V. Midha, A. Motyer, S. C. Ng, D. T. Okou, S. Raychaudhuri, J. Schembri, S. Schreiber, K. Song, A. Sood, A. Takahashi, E. A. Torres, J. Umeno, B. Z. Alizadeh, R. K. Weersma, S. H. Wong, K. Yamazaki, T. H. Karlsen, J. D. Rioux, S. R. Brant, A. Franke:
    Trans-ethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals shared but also ethnicity-specific disease associations
    Human Molecular Genetics, 10.1093/hmg/ddab017

2020

  • Aikaterini Hatzioannou, Aggelos Banos, Theodore Sakelaropoulos, Constantinos Fedonidis, Maria-Sophia Vidali, Maren Köhne, Kristian Händler, Louis Boon, Ana Henriques, Vasiliki Koliaraki, Panagiotis Georgiadis, Jerome Zoidakis, Aikaterini Termentzi, Marc Beyer, Triantafyllos Chavakis, Dimitrios Boumpas, Aristotelis Tsirigos, Panayotis Verginis:
    An intrinsic role of IL-33 in Treg cell-mediated tumor immunoevasion
    Nature Immunology, 10.1038/s41590-019-0555-2

  • Tiphaine C. Martin, Mirna Šimurina, Marta Ząbczyńska, Marina Martinić-Kavur, Magdalena Rydlewska, Marija Pezer, Kamila Kozłowska, Andrea Burri, Marija Vilaj, Renata Turek-Jabrocka, Milena Krnjajić-Tadijanović, Małgorzata Trofimiuk- Müldner, Ivo Ugrina, Anna Lityńska, Alicja Hubalewska-Dydejczyk, Irena Trbojević-Akmačić, Ee Mun Lim, John P. Walsh, Ewa Pochec, Tim D. Spector, Scott G. Wilson, Gordan Lauc:
    Decreased immunoglobulin G core fucosylation, a player in antibody-dependent cell-mediated cytotoxicity, is associated with autoimmune thyroid diseases
    Mollecular Cellular Proteomics

  • Mihai G. Netea, Jorge Domínguez-Andrés, Luis B. Barreiro, Triantafyllos Chavakis, Maziar Divangahi, Elaine Fuchs, Leo A. B. Joosten, Jos W. M. van der Meer, Musa M. Mhlanga, Willem J. M. Mulder, Niels P. Riksen, Andreas Schlitzer, Joachim L. Schultze, Christine Stabell Benn, Joseph C. Sun, Ramnik J. Xavier, Eicke Latz:
    Defining trained immunity and its role in health and disease
    Nature Reviews Immunology 20/6, 10.1038/s41577-020-0285-6

  • Olatz Mompeo,Sarah E. Berry,Tim D. Spector,Cristina Menni,Massimo Mangino and Rachel Gibson:
    Differential associations between a priori diet quality scores and markers of cardiovascular health in women: cross-sectional analyses from TwinsUK
    British Journal of Nutrition, 1 - 11, https://doi.org/10.1017/S000711452000495X

  • Anke Liepelt; Philipp Hohlstein; Hendrik Gussen; Jia Xue; Anna C. Aschenbrenner; Anna C. Aschenbrenner; Thomas Ulas; Lukas Buendgens; Klaudia Theresa Warzecha; Matthias Bartneck; Tom Luedde; Christian Trautwein; Joachim L. Schultze; Alexander Koch; Frank Tacke; Frank Tacke:
    Differential Gene Expression in Circulating CD14+ Monocytes Indicates the Prognosis of Critically Ill Patients with Sepsis
    Journal of Clinical Medicine, 10.18154/rwth-2020-04417

  • Joana P. Bernardes, Neha Mishra, Florian Tran, Thomas Bahmer, Lena Best, Johanna I. Blase, Dora Bordoni, Jeanette Franzenburg, Jonathan Josephs-Spaulding, Philipp Köhler, Axel Künstner, Elisa Rosati, Anna C. Aschenbrenner, Petra Bacher, Nathan Baran, Teide Boysen, Burkhard Brandt, Niklas Bruse, Jonathan Dörr, Andreas Dräger, Gunnar Elke, David Ellinghaus, Julia Fischer, Michael Forster, Andre Franke, Sören Franzenburg, Norbert Frey, Anette Friedrichs, Janina Fuß, Andreas Glück, Jacob Hamm, Finn Hinrichsen, Marc P. Hoeppner, Simon Imm, Ralf Junker, Sina Kaiser, Ying H. Kan, Rainer Knoll, Christoph Lange, Georg Laue, Clemens Lier, Matthias Lindner, Georgios Marinos, Robert Markewitz, Jacob Nattermann, Rainer Noth, Peter Pickkers, Klaus F. Rabe, Alina Renz, Christoph Röcken, Jan Rupp, Annika Schaffarzyk, Alexander Scheffold, Jonas Schulte-Schrepping, Domagoj Schunk, Dirk Skowasch, Thomas Ulas, Klaus-Peter Wandinger, Michael Wittig, Johannes Zimmermann, Hauke Busch, Bimba F. Hoyer, Christoph Kaleta, Jan Heyckendorf, Matthijs Kox, Jan Rybniker, Stefan Schreiber, Joachim L. Schultze, Philip Rosenstiel, HCA Lung Biological Network, the Deutsche COVID-19 Omics Initiative (DeCOI):
    Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19
    Immunity, 10.1016/j.immuni.2020.11.017

  • NCX1 represents an ionic Na+ sensing mechanism in macrophages:
    NCX1 represents an ionic Na+ sensing mechanism in macrophages
    PLOS Biology 18/6, 10.1371/journal.pbio.3000722

  • Elena De Domenico, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Matthias Becker, Kristian Händler, Joachim L. Schultze:
    Optimized workflow for single-cell transcriptomics on infectious diseases including COVID-19
    STAR Protocols 1/3, https://doi.org/10.1016/j.xpro.2020.100233

  • Jonas Schulte-Schrepping, Nico Reusch, Daniela Paclik, Kevin Baßler, Stephan Schlickeiser, Bowen Zhang, Benjamin Krämer, Tobias Krammer, Sophia Brumhard, Lorenzo Bonaguro, Elena De Domenico, Daniel Wendisch, Martin Grasshoff, Theodore S. Kapellos, Michael Beckstette, Tal Pecht, Adem Saglam, Oliver Dietrich, Henrik E. Mei, Axel R. Schulz, Claudia Conrad, Désirée Kunkel, Ehsan Vafadarnejad, Cheng-Jian Xu, Arik Horne, Miriam Herbert, Anna Drews, Charlotte Thibeault, Moritz Pfeiffer, Stefan Hippenstiel, Andreas Hocke, Holger Müller-Redetzky, Katrin-Moira Heim, Felix Machleidt, Alexander Uhrig, Laure Bosquillon de Jarcy, Linda Jürgens, Miriam Stegemann, Christoph R. Glösenkamp, Hans-Dieter Volk, Christine Goffinet, Markus Landthaler, Emanuel Wyler, Philipp Georg, Maria Schneider, Chantip Dang-Heine, Nick Neuwinger, Kai Kappert, Rudolf Tauber, Victor Corman, Jan Raabe, Kim Melanie Kaiser, Michael To Vinh, Gereon Rieke, Christian Meisel, Thomas Ulas, Matthias Becker, Robert Geffers, Martin Witzenrath, Christian Drosten, Norbert Suttorp, Christof von Kalle, Florian Kurth, Kristian Händler, Joachim L. Schultze, Anna C. Aschenbrenner, Yang Li, Jacob Nattermann, Birgit Sawitzki, Antoine-Emmanuel Saliba, Leif Erik Sander and Deutsche COVID-19 OMICS Initiative (DeCOI):
    Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment
    Cell

  • Mohamad Jawhara, Signe Bek Sørensen, Berit Lilienthal Heitmann, Þórhallur Ingi Halldórsson, Andreas Kristian Pedersen, Vibeke Andersen:
    The Relation between Red Meat and Whole-Grain Intake and the Colonic Mucosal Barrier: A Cross-Sectional Study
    Nutrients, 10.3390/nu12061765

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